CDS
| Accession Number | TCMCG009C25279 |
| gbkey | CDS |
| Protein Id | XP_030481772.1 |
| Location | complement(join(55174873..55175064,55175690..55175869,55176236..55176952,55177416..55177562,55177844..55178036,55178156..55178289,55178400..55178522)) |
| Gene | LOC115698747 |
| GeneID | 115698747 |
| Organism | Cannabis sativa |
Protein
| Length | 561aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA560384 |
| db_source | XM_030625912.1 |
| Definition | probable E3 ubiquitin-protein ligase RHG1A isoform X1 [Cannabis sativa] |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | twin BRCT domain |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction |
R00274
[VIEW IN KEGG] R07034 [VIEW IN KEGG] R07035 [VIEW IN KEGG] |
| KEGG_rclass |
RC00011
[VIEW IN KEGG] RC00982 [VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K00432
[VIEW IN KEGG] |
| EC |
1.11.1.9
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00480
[VIEW IN KEGG] ko00590 [VIEW IN KEGG] ko04918 [VIEW IN KEGG] map00480 [VIEW IN KEGG] map00590 [VIEW IN KEGG] map04918 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGATTCTGTGATTGCGACCGTTAGTGGGTACCATGGAACCCAGCGTTTAAACCTCGTTAGGCTCATACTTCATGCCGGTGCCCATCGCGTGGGTCGAGTGTCAGAATCAATAACTCATCTGGTTTGCTGGAAATTTGAGGGAAGGAGATTTGATCTTGCTAAGAGTTTCAATACGATAATAGTCAACCATCGATGGGTCGAGGATTGCATAAAGCAAGGAAAACGTCTTCCGGAGGAGCCTTATACTCTTCAAAGTGGGCAAGAAGTTGGGCCCTTAACGATGGAAGTTCCACGTGTTGCTGAAGTTGGTGTCTTCAAGAAAAATAAAAAACGCAAATTGCTTTCTCACGAATCAAATACTCGTGATGGCTTTCTAAAACAAAGTGGCGATACAGCCCTTGGAATTTCTGGGAATCCTGTTCGGAAAACTTCTTCTTTAATGAATGAGAATGTGTTTCCTGATATGAATAATCTCAGCACTTCTCAGAAGAAGTCAAAGCATAAACCTGTTAGAAGCCATTTTGGGAAAAATTTGCCTTCAAGTAGCAGATGCTCTATTCAAGAATCTCCTTCATCTGGATTACTTAGAAACCAGCATGCGGAGTCAAGTTCTGATTCTTCAATGGATTTGGTGAGAGGTAAAAGAAAGAGCTCCAATGGTAATGGAAGAAATAAACCTCTTTCTCGTTCTCAAAAAAACTATGTAGAGTCAAGTTCTCATTCGTCTATAGAATTGGTGAGAGGTAAAAGAAAGTGTTCCATTGGTAACGAAAGAAATAAGGCTGAAACCTCACGTAAAGGAAGGAGGCTCTTTAAAAAGATGAAAAACAAAGATACTGTGGACCTTTGCTCTTCAGACTCTAGTGAAGACTGCAGTCCTGTCAGAGTCAACAACTCAAATTACGAAGATGTCTCAACTCTGTTTCATCATGTAAATGGAGAAACACATGACAATGTGTTAGAAGACGGAAGAATATCTGGTGAGGGATTTTCTAACCATAGGAAAACTAGAGTTGATGATTCTAAAGCTGTAGTTGATGGTCCTATTTGTATAAATGCTTCAATGGATTCAAATGTGCATGCTGAGAATGCAAGTACTGCACAAAGGACTTCAGAAGATGGATGTTCGGGTGTAGATAAGTCAGATGAGGACCCAGCAAAAGGGATTGAGATTACTCAGAATTCTGAAATTGATTCTTCGATGGAGTTATCGTGTGTTATATGTTGGGCAGATTACAGCTCAACTCGAGGAGTTCTGCATTGTGGTCACCGATTCTGTTATTCATGCATCAAAGAATGGGCTGATCATATGGCTTTAAGAAGAAAGATATCTACATGCCCTTTGTGCAAGAAAAGTTTTAATAACATTATCCAGTATGAGGACACAGCTACCATTGATCAGAAGGTTTACTCACAAACCGTTCCATGTGGCTTATCAACTATGGACTTGTTGAAACTTTATGAACAGGACACTCACAATGCTAGTGCTCAGGTTGAACAGTATGAACAACCAGCAGCTGTTTGTATCGTATGCTGTCGTGTGGAGCCAGTGGATCTTCTTGTCATGTGCAATGTGTGTCAAAATCGACGCATTCATTCCTACTGCCTGGACCCTCCTATCGATCCATGGACGTGCATGGACTGCAAAGATCTACAAAGACACTACCTTTACAACCGTCGATAA |
| Protein: MDSVIATVSGYHGTQRLNLVRLILHAGAHRVGRVSESITHLVCWKFEGRRFDLAKSFNTIIVNHRWVEDCIKQGKRLPEEPYTLQSGQEVGPLTMEVPRVAEVGVFKKNKKRKLLSHESNTRDGFLKQSGDTALGISGNPVRKTSSLMNENVFPDMNNLSTSQKKSKHKPVRSHFGKNLPSSSRCSIQESPSSGLLRNQHAESSSDSSMDLVRGKRKSSNGNGRNKPLSRSQKNYVESSSHSSIELVRGKRKCSIGNERNKAETSRKGRRLFKKMKNKDTVDLCSSDSSEDCSPVRVNNSNYEDVSTLFHHVNGETHDNVLEDGRISGEGFSNHRKTRVDDSKAVVDGPICINASMDSNVHAENASTAQRTSEDGCSGVDKSDEDPAKGIEITQNSEIDSSMELSCVICWADYSSTRGVLHCGHRFCYSCIKEWADHMALRRKISTCPLCKKSFNNIIQYEDTATIDQKVYSQTVPCGLSTMDLLKLYEQDTHNASAQVEQYEQPAAVCIVCCRVEPVDLLVMCNVCQNRRIHSYCLDPPIDPWTCMDCKDLQRHYLYNRR |